About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama31509
Ama31510
Ama31512
Ama31513AUTOPHAGY-RELATED 2, ISOFORM A
Ama31514
Ama31518
Ama31519PROTEIN DISULFIDE ISOMERASE
Ama31520HISTONE DEACETYLASE HDAC1-RELATED
Ama31523HOMEO BOX HB9 LIKE A-RELATED
Ama31524RHO FAMILY GTPASE
Ama31525STEROL O-ACYLTRANSFERASE
Ama31526INTERFERON-INDUCIBLE GTPASE
Ama31527INTERFERON-INDUCIBLE GTPASE
Ama31528INTERFERON-INDUCIBLE GTPASE
Ama31529INTERFERON-INDUCIBLE GTPASE
Ama31530TRANSPOSABLE ELEMENT-RELATED
Ama31531INTERFERON-INDUCIBLE GTPASE
Ama31532AP ENDONUCLEASE
Ama31533REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama31535
Ama31536SOLUTE CARRIER FAMILY 40 MEMBER
Ama31538WD40 REPEAT PROTEIN
Ama31540
Ama31541-
Ama31542
Ama31543FORMATE DEHYDROGENASE 1
Ama31544
Ama31546ZINC FINGER PROTEIN
Ama31547SODIUM/NUCLEOSIDE COTRANSPORTER
Ama31548G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Ama31549ROLLING PEBBLES, ISOFORM B
Ama31550CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama31551SODIUM/NUCLEOSIDE COTRANSPORTER
Ama31553AQUAPORIN
Ama31556
Ama31557
Ama31558UNCHARACTERIZED DUF1308
Ama31559ATP-DEPENDENT DNA HELICASE
Ama31560THAP DOMAIN PROTEIN
Ama31561
Ama31564
Ama31565THREE PRIME REPAIR EXONUCLEASE 1, 2
Ama31567REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama31569N-ACETYLGALACTOSAMINYLTRANSFERASE
Ama31575ALDEHYDE DEHYDROGENASE-RELATED
Ama31576
Ama31578RAC GTPASE-ACTIVATING PROTEIN 1
Ama3157952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama31580
Ama31581
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