About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama31172SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
Ama31174NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Ama31175REVERSE TRANSCRIPTASES
Ama31176
Ama31177
Ama3117852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama31179ZINC FINGER PROTEIN
Ama31181-
Ama31182
Ama31183
Ama31184SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Ama31185
Ama31186KERATIN ASSOCIATED PROTEIN 3-3-RELATED
Ama31188UNCHARACTERIZED
Ama31189
Ama31192ATP-BINDING CASSETTE SUB-FAMILY B
Ama31193SYNAPTOSOMAL ASSOCIATED PROTEIN
Ama31194RADICAL S-ADENOSYL METHIONINE DOMAIN-CONTAINING PROTEIN 2
Ama31197SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASE
Ama31198
Ama31199MALE FERTILITY FACTOR KL5
Ama31200MALE FERTILITY FACTOR KL5
Ama31201MALE FERTILITY FACTOR KL5
Ama31205IP01015P-RELATED
Ama31206COILED-COIL DOMAIN-CONTAINING PROTEIN 89
Ama31207
Ama31210POLYCYSTIN-1
Ama31211POLYCYSTIN-1
Ama31213POLYCYSTIN-1
Ama31216
Ama31227PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE
Ama31229N-ACETYLGALACTOSAMINYLTRANSFERASE
Ama31230ADP RIBOSYLATION FACTOR-RELATED
Ama31231CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Ama31232
Ama31233TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Ama31235
Ama31236INO80 COMPLEX SUBUNIT C
Ama31237METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED
Ama31238
Ama31239METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED
Ama31240
Ama31241
Ama31242PROTEIN YAE1 HOMOLOG
Ama31243NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
Ama31244NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
Ama31245
Ama31247UNCHARACTERIZED
Ama31248UNCHARACTERIZED
Ama312493-KETOACYL-COA THIOLASE, PEROXISOMAL
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