The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama30831 | |
Ama30832 | |
Ama30833 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
Ama30837 | NXPE FAMILY MEMBER |
Ama30838 | PROTEIN CBG23764 |
Ama30839 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama30840 | 39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL |
Ama30841 | DOPAMINE BETA HYDROXYLASE RELATED |
Ama30842 | LYSYL OXIDASE-LIKE-RELATED |
Ama30844 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama30845 | SURFEIT LOCUS PROTEIN 2 |
Ama30846 | UNCHARACTERIZED |
Ama30847 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama30848 | |
Ama30849 | UNCHARACTERIZED |
Ama30850 | CONTACTIN 5 |
Ama30851 | PROPERDIN |
Ama30852 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
Ama30853 | |
Ama30854 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
Ama30856 | ARYLSULFATASE |
Ama30857 | CRUMBS FAMILY MEMBER |
Ama30858 | PROTEIN SIDEKICK |
Ama30859 | CYTOKINE RECEPTOR |
Ama30860 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Ama30862 | |
Ama30863 | TETRATRICOPEPTIDE REPEAT PROTEIN 19 |
Ama30864 | UNCHARACTERIZED |
Ama30865 | |
Ama30866 | UNCHARACTERIZED |
Ama30867 | PNAS-RELATED |
Ama30868 | |
Ama30869 | |
Ama30870 | |
Ama30871 | UNCHARACTERIZED |
Ama30872 | FAMILY WITH SEQUENCE SIMILARITY 102 |
Ama30874 | LIM/HOMEOBOX PROTEIN LHX |
Ama30877 | |
Ama30878 | CYSTATIN FAMILY MEMBER |
Ama30879 | PEPTIDASE M20 |
Ama30880 | 40S RIBOSOMAL PROTEIN S8 |
Ama30881 | UNCHARACTERIZED |
Ama30882 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
Ama30883 | MCG48959-RELATED |
Ama30884 | PEPTIDASE |
Ama30885 | |
Ama30886 | |
Ama30887 | INHIBITOR OF APOPTOSIS |
Ama30891 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama30892 | INHIBITOR OF APOPTOSIS |