The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama30553 | |
Ama30554 | |
Ama30555 | DRAB11-RELATED |
Ama30556 | |
Ama30558 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama30559 | VESICLE-TRAFFICKING PROTEIN SEC22B |
Ama30560 | TUBULIN |
Ama30563 | DEOXYRIBONUCLEASE II |
Ama30564 | ATP-DEPENDENT RNA HELICASE |
Ama30565 | |
Ama30566 | ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 |
Ama30567 | |
Ama30568 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
Ama30572 | REGULATOR OF G-PROTEIN SIGNALING 3 |
Ama30573 | JANUS-A/JANUS-B |
Ama30575 | |
Ama30576 | CATION-TRANSPORTING ATPASE-RELATED |
Ama30577 | |
Ama30578 | |
Ama30579 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama30580 | ACIREDUCTONE DIOXYGENASE |
Ama30581 | GUANYLYL CYCLASE |
Ama30582 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
Ama30583 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama30584 | |
Ama30585 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
Ama30587 | |
Ama30589 | |
Ama30590 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
Ama30591 | |
Ama30593 | |
Ama30594 | TUBULIN |
Ama30595 | TUBULIN |
Ama30596 | TUBULIN |
Ama30597 | TUBULIN |
Ama30598 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama30599 | G PROTEIN-COUPLED RECEPTOR |
Ama30600 | |
Ama30602 | TUBULIN |
Ama30603 | TUBULIN |
Ama30605 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama30607 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30608 | |
Ama30609 | PA14 DOMAIN-CONTAINING PROTEIN |
Ama30610 | |
Ama30611 | |
Ama30612 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama30613 | |
Ama30614 | TUBULIN |
Ama30615 | TUBULIN |