About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama30230CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama30231RAB GDP/GTP EXCHANGE FACTOR
Ama30232RAB GDP/GTP EXCHANGE FACTOR
Ama30233
Ama30234PROTEIN VAV
Ama30235
Ama30236RAB9 EFFECTOR PROTEIN WITH KELCH MOTIFS
Ama30241RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama30242RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Ama30243FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Ama30244FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Ama30248
Ama30249TRANSPOSABLE ELEMENT-RELATED
Ama30250
Ama30251TESTIS-SPECIFIC Y-ENCODED PROTEIN
Ama30252CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Ama30256VESICLE-ASSOCIATED MEMBRANE PROTEIN 4
Ama30257E3 UBIQUITIN-PROTEIN LIGASE COP1
Ama30258
Ama30259OS02G0815200 PROTEIN
Ama30260EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G
Ama30261OS02G0815200 PROTEIN
Ama30262TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
Ama30263
Ama30265
Ama30266LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
Ama30267SI:CH211-59O9.10
Ama30268RING/U-BOX SUPERFAMILY PROTEIN
Ama30269
Ama30270TRANSPOSABLE ELEMENT-RELATED
Ama30271
Ama30272
Ama30273
Ama30275VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN
Ama30277REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama30278DNA POLYMERASE
Ama30279PARANEOPLASTIC ANTIGEN
Ama30280
Ama30281
Ama30282EGF-LIKE DOMAIN-CONTAINING PROTEIN
Ama30283
Ama30284VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN
Ama30285
Ama30286L1 TRANSPOSABLE ELEMENT-RELATED
Ama30289RMLC-LIKE JELLY ROLL FOLD PROTEIN
Ama30293
Ama30295PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
Ama30296-
Ama302_5db7b01aVASOHIBIN-1-LIKE ISOFORM X2
Ama30301
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