The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama30052 | |
Ama30053 | UNCHARACTERIZED |
Ama30054 | |
Ama30055 | |
Ama30056 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama30057 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama30059 | NUCLEAR HORMONE RECEPTOR |
Ama30060 | PR DOMAIN ZINC FINGER PROTEIN |
Ama30061 | SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 |
Ama30062 | AMIDOHYDROLASE |
Ama30063 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama30064 | SI:CH211-196P9.1-RELATED |
Ama30065 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama30066 | GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN |
Ama30067 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama30068 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama30069 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 77 |
Ama30070 | |
Ama30071 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama30073 | |
Ama30074 | ARGININOSUCCINATE SYNTHASE |
Ama30075 | LARGE PROLINE-RICH PROTEIN BAG6 |
Ama30076 | PEROXISOME ASSEMBLY PROTEIN 10 |
Ama30077 | HYR DOMAIN-CONTAINING PROTEIN |
Ama30081 | HYR DOMAIN-CONTAINING PROTEIN |
Ama30082 | |
Ama30085 | RING FINGER PROTEIN 141-RELATED |
Ama30086 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Ama30087 | |
Ama30088 | |
Ama30089 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama30090 | |
Ama30091 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama30092 | |
Ama30093 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama30094 | |
Ama30095 | |
Ama30097 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama30098 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama30099 | |
Ama30100 | PROTEIN CBG22215 |
Ama30101 | INHIBITOR OF APOPTOSIS |
Ama30102 | |
Ama30103 | IP13529P |
Ama30105 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
Ama30107 | MULTICOPPER OXIDASE-RELATED |
Ama30108 | |
Ama30110 | |
Ama30112 | MULTICOPPER OXIDASE-RELATED |
Ama30113 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |