The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama29602 | |
Ama29603 | |
Ama29607 | |
Ama29608 | |
Ama29609 | UNCHARACTERIZED |
Ama29610 | UNCHARACTERIZED |
Ama29612 | |
Ama29613 | |
Ama29614 | |
Ama29615 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama29616 | |
Ama29617 | |
Ama29623 | CAT EYE SYNDROME CRITICAL REGION PROTEIN 6 |
Ama29625 | INSULIN GENE ENHANCER PROTEIN |
Ama29626 | LIM/HOMEOBOX PROTEIN LHX |
Ama29627 | EXS-RELATED PROTEIN |
Ama29633 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
Ama29634 | SOLUTE CARRIER FAMILY 5 |
Ama29635 | |
Ama29636 | |
Ama29637 | POLY [ADP-RIBOSE] POLYMERASE |
Ama29638 | POLY [ADP-RIBOSE] POLYMERASE |
Ama29639 | POLY [ADP-RIBOSE] POLYMERASE |
Ama29640 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED |
Ama29647 | EXS-RELATED PROTEIN |
Ama29656 | EXS-RELATED PROTEIN |
Ama29666 | EXS-RELATED PROTEIN |
Ama29667 | EXS-RELATED PROTEIN |
Ama29674 | |
Ama29675 | - |
Ama29677 | |
Ama29678 | |
Ama29679 | - |
Ama29680 | RIBOSOMAL PROTEIN L5-RELATED |
Ama29682 | 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR |
Ama29683 | |
Ama29684 | |
Ama29685 | |
Ama29686 | |
Ama29687 | |
Ama29688 | |
Ama29690 | SI:CH1073-475A24.1 |
Ama29692 | |
Ama29693 | |
Ama296_5db7b01a | |
Ama29708 | EXS-RELATED PROTEIN |
Ama29715 | EXS-RELATED PROTEIN |
Ama29718 | LD11652P |
Ama29719 | LD11652P |
Ama29721 | SOLUTE CARRIER FAMILY 5 |