The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama29192 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama29193 | |
Ama29194 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
Ama29198 | T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN |
Ama29199 | GOLGI REASSEMBLY STACKING PROTEIN GRASP |
Ama291_5db7b01a | MYOSIN LIGHT CHAIN 1, 3 |
Ama29200 | NONSYNDROMIC HEARING IMPAIRMENT PROTEIN |
Ama29201 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama29202 | MYOTROPHIN |
Ama29203 | REVERSE TRANSCRIPTASES |
Ama29204 | - |
Ama29205 | |
Ama29206 | |
Ama29207 | DEATH-ASSOCIATED PROTEIN 1 |
Ama29208 | MYOINOSITOL OXYGENASE |
Ama29209 | |
Ama29210 | |
Ama29212 | UBIQUITIN-CONJUGATING ENZYME E2 |
Ama29213 | INNEXIN |
Ama29214 | INNEXIN |
Ama29215 | |
Ama29216 | INNEXIN |
Ama29217 | INNEXIN |
Ama29218 | INNEXIN |
Ama29219 | INNEXIN |
Ama29220 | INNEXIN |
Ama29221 | FATTY ACID DESATURASE 2 |
Ama29223 | DNAJ HOMOLOG SUBFAMILY B MEMBER 11 |
Ama29224 | THROMBOSPONDIN-TYPE LAMININ G DOMAIN AND EAR REPEAT-CONTAINING |
Ama29225 | RETINOL-BINDING PROTEIN 4 |
Ama29226 | MODULATOR OF FTSH PROTEASE HFLC |
Ama29227 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama29232 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama29234 | |
Ama29235 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
Ama29236 | |
Ama29237 | |
Ama29238 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama29239 | |
Ama29240 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14 |
Ama29242 | |
Ama29243 | |
Ama29244 | |
Ama29245 | |
Ama29246 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29247 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29248 | PEPTIDASE |
Ama29249 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29250 | G-PROTEIN COUPLED RECEPTOR |
Ama29251 |