The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama28984 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama28986 | |
Ama28987 | |
Ama28988 | OS08G0421900 PROTEIN |
Ama28989 | |
Ama28990 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama28991 | |
Ama28993 | |
Ama28994 | BLEOMYCIN HYDROLASE |
Ama28995 | BLEOMYCIN HYDROLASE |
Ama28996 | BLEOMYCIN HYDROLASE |
Ama28997 | |
Ama28998 | |
Ama28999 | |
Ama28_5db84494 | ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN |
Ama29000 | |
Ama29001 | |
Ama29002 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
Ama29008 | |
Ama29010 | ALDEHYDE DEHYDROGENASE-RELATED |
Ama29011 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
Ama29012 | LUPUS LA PROTEIN-RELATED |
Ama29013 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
Ama29014 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama29015 | BEIGE/BEACH-RELATED |
Ama29016 | BEIGE/BEACH-RELATED |
Ama29017 | BEIGE/BEACH-RELATED |
Ama29019 | DNAJ HOMOLOG SUBFAMILY C MEMBER 7 |
Ama29020 | THAP DOMAIN PROTEIN |
Ama29022 | NUCLEAR HORMONE RECEPTOR |
Ama29023 | PUTATIVE-RELATED |
Ama29024 | COP9 SIGNALOSOME COMPLEX SUBUNIT 8 |
Ama29025 | GENERAL RECEPTOR FOR PHOSPHOINOSITIDES 1-ASSOCIATED SCAFFOLD PROTEIN-RELATED |
Ama29026 | CELL DIVISION PROTEIN KINASE |
Ama29027 | DNAJ HOMOLOG SUBFAMILY C MEMBER 13 |
Ama29028 | DNAJ HOMOLOG SUBFAMILY C MEMBER 13 |
Ama29029 | - |
Ama29030 | |
Ama29031 | |
Ama29032 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama29033 | |
Ama29034 | |
Ama29036 | |
Ama29038 | |
Ama29045 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama29046 | G-PROTEIN COUPLED RECEPTOR |
Ama29047 | INHIBITOR OF APOPTOSIS |
Ama29048 | |
Ama29049 | |
Ama29050 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |