The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama28918 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama28919 | |
Ama28920 | EXPRESSED PROTEIN |
Ama28921 | |
Ama28922 | EXPRESSED PROTEIN |
Ama28923 | ATP-DEPENDENT DNA HELICASE |
Ama28924 | THAP DOMAIN PROTEIN |
Ama28925 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama28926 | PUTATIVE-RELATED |
Ama28927 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama28929 | SCHLAFEN |
Ama28930 | SCHLAFEN |
Ama28931 | SCHLAFEN |
Ama28932 | |
Ama28933 | PROTEIN CASC3 |
Ama28934 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama28935 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
Ama28936 | UNCHARACTERIZED |
Ama28937 | DNA PRIMASE SMALL SUBUNIT |
Ama28938 | UNCHARACTERIZED |
Ama28939 | INOSITOL POLYPHOSPHATE KINASE |
Ama28940 | TUBULIN POLYGLUTAMYLASE COMPLEX SUBUNIT 1 |
Ama28941 | |
Ama28943 | |
Ama28947 | GENE 9195-RELATED-RELATED |
Ama28948 | GENE 9195-RELATED-RELATED |
Ama28949 | GENE, 32742-RELATED-RELATED |
Ama28950 | GENE 9195-RELATED-RELATED |
Ama28951 | |
Ama28952 | ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 |
Ama28953 | DRAB11-RELATED |
Ama28954 | - |
Ama28955 | CELL DIVISION CYCLE 16,23,27 |
Ama28957 | |
Ama28959 | |
Ama28961 | |
Ama28962 | IMPORTIN BETA |
Ama28964 | SI:CH211-156B7.4 |
Ama28967 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama28969 | |
Ama28970 | DNAJ HOMOLOG SUBFAMILY C MEMBER 10 |
Ama28971 | DNAJ HOMOLOG SUBFAMILY C MEMBER 10 |
Ama28972 | DNAJ HOMOLOG SUBFAMILY C MEMBER 10 |
Ama28973 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama28974 | INHIBITOR OF APOPTOSIS |
Ama28976 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama28978 | OVARIAN CARCINOMA ANTIGEN CA125-RELATED |
Ama28979 | PROTEIN FAM207A |
Ama28980 | VILLIN |
Ama28982 | PUTATIVE-RELATED |