The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama29114 | CARDIOACCELERATORY PEPTIDE RECEPTOR-RELATED |
Ama29115 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama29116 | |
Ama29117 | |
Ama29119 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29120 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
Ama29121 | OXIDASE/PEROXIDASE |
Ama29124 | OXYSTEROL-BINDING PROTEIN-RELATED |
Ama29125 | |
Ama29126 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
Ama29127 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29128 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29130 | LUPUS LA PROTEIN-RELATED |
Ama29131 | |
Ama29133 | |
Ama29135 | SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 2-RELATED |
Ama29136 | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 |
Ama29137 | N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE |
Ama29138 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama29139 | |
Ama29140 | |
Ama29141 | INHIBITOR OF APOPTOSIS |
Ama29142 | |
Ama29145 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama29146 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama29148 | |
Ama29149 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama29156 | |
Ama29157 | |
Ama29158 | |
Ama29160 | |
Ama29161 | |
Ama29164 | |
Ama29165 | |
Ama29167 | |
Ama29170 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29174 | TRANSPOSABLE ELEMENT-RELATED |
Ama29177 | |
Ama29178 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama29179 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama29181 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama29183 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama29184 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama29185 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
Ama29186 | PROTEIN CBG23764 |
Ama29187 | BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1 |
Ama29188 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
Ama29189 | - |
Ama29190 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
Ama29191 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |