The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama29252 | |
Ama29253 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29254 | |
Ama29255 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama29256 | |
Ama29257 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29258 | |
Ama29259 | |
Ama29261 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama29262 | |
Ama29264 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
Ama29267 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
Ama29268 | METALLOPROTEASE INHIBITOR |
Ama29269 | |
Ama29272 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
Ama29273 | |
Ama29274 | DOPAMINE BETA HYDROXYLASE RELATED |
Ama29275 | FRIZZLED |
Ama29276 | PR DOMAIN ZINC FINGER PROTEIN |
Ama29277 | PROPERDIN |
Ama29278 | |
Ama29279 | PROTEIN CBG10425 |
Ama29280 | PROTEIN CBG10425 |
Ama29281 | INHIBITOR OF APOPTOSIS |
Ama29282 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama29283 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama29284 | ANION EXCHANGE PROTEIN |
Ama29286 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
Ama29287 | 50S RIBOSOMAL PROTEIN L4 |
Ama29288 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama29289 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
Ama29290 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama29291 | |
Ama29292 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama29293 | ZINC FINGER PROTEIN |
Ama29294 | OBG GTPASE FAMILY |
Ama29295 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
Ama29296 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
Ama29297 | OXIDASE/PEROXIDASE |
Ama29298 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama29299 | IP01015P-RELATED |
Ama292_5db7b01a | WD-REPEAT PROTEIN-RELATED |
Ama29302 | PROTEIN PHOSPHATASE 2C |
Ama29303 | |
Ama29309 | |
Ama29310 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama29311 | TROPONIN |
Ama29312 | - |
Ama29313 | 2-HYDROXYACID DEHYDROGENASE-RELATED |
Ama29315 | CELL CYCLE CONTROL PROTEIN CWF22-RELATED |