The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama29420 | EXS-RELATED PROTEIN |
Ama29428 | POU DOMAIN CLASS 2-ASSOCIATING FACTOR 1 |
Ama29432 | POU DOMAIN CLASS 2-ASSOCIATING FACTOR 1 |
Ama29468 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama29469 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
Ama29470 | INNEXIN |
Ama29471 | |
Ama29472 | FIBRILLIN-RELATED |
Ama29473 | |
Ama29474 | FOLLICULIN FAMILY MEMBER |
Ama29475 | |
Ama29476 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29477 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29479 | |
Ama29480 | |
Ama29481 | |
Ama29482 | FOLLICULIN FAMILY MEMBER |
Ama29483 | |
Ama29484 | |
Ama29485 | FIBRILLIN-RELATED |
Ama29486 | MUCIN 4-RELATED |
Ama29488 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
Ama29489 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama29490 | MUCIN 4-RELATED |
Ama29499 | POU DOMAIN CLASS 2-ASSOCIATING FACTOR 1 |
Ama29505 | EXS-RELATED PROTEIN |
Ama29506 | POU DOMAIN CLASS 2-ASSOCIATING FACTOR 1 |
Ama29507 | ARYLSULFATASE |
Ama29508 | ARYLSULFATASE |
Ama29509 | INNEXIN |
Ama29510 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
Ama29511 | MUCIN 4-RELATED |
Ama29512 | PEPTIDASE |
Ama29513 | UNCHARACTERIZED |
Ama29516 | MUCIN 12EA-RELATED |
Ama29517 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29518 | BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 1A |
Ama29519 | SPHINGOMYELIN PHOSPHODIESTERASE |
Ama29520 | SPHINGOMYELIN PHOSPHODIESTERASE |
Ama29521 | NUCLEAR HORMONE RECEPTOR |
Ama29522 | COILED-COIL DOMAIN-CONTAINING PROTEIN 103 |
Ama29523 | PR DOMAIN ZINC FINGER PROTEIN |
Ama29528 | |
Ama29529 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama29530 | BTB/POZ DOMAIN-CONTAINING |
Ama29532 | HILLARIN |
Ama29533 | |
Ama29534 | ORGANIC ANION TRANSPORTER |
Ama29535 | |
Ama29536 | ORGANIC ANION TRANSPORTER |