The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama29317 | OLIGOPEPTIDE TRANSPORTER-RELATED |
Ama29319 | |
Ama29321 | BTK-BINDING PROTEIN-RELATED |
Ama29324 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama29325 | |
Ama29326 | CADHERIN-23 |
Ama29327 | CYTOCHROME P450 FAMILY 4 |
Ama29328 | MEIOSIS-EXPRESSED GENE 1 PROTEIN |
Ama29329 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama29330 | |
Ama29331 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29332 | |
Ama29333 | GUANYLATE KINASE-RELATED |
Ama29334 | PEPTIDASE |
Ama29336 | SI:CH73-193C12.2-RELATED |
Ama29337 | AGAP011099-PA |
Ama29338 | SERINE/THREONINE-PROTEIN KINASE TAO |
Ama29339 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama29341 | SUGAR-1-PHOSPHATE GUANYL TRANSFERASE |
Ama29342 | |
Ama29343 | |
Ama29344 | AGAP005574-PA |
Ama29345 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama29346 | UNCHARACTERIZED |
Ama29347 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama29348 | SLL0310 PROTEIN |
Ama29349 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
Ama29350 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
Ama29353 | SUGAR-1-PHOSPHATE GUANYL TRANSFERASE |
Ama29354 | PROTEIN CBG10425 |
Ama29355 | |
Ama29356 | |
Ama29357 | PROTEIN CBG10425 |
Ama29358 | |
Ama29359 | SUGAR-1-PHOSPHATE GUANYL TRANSFERASE |
Ama29362 | NF-KAPPA-B INHIBITOR ALPHA |
Ama29363 | |
Ama29364 | |
Ama29365 | |
Ama29366 | ROLLING PEBBLES, ISOFORM B |
Ama29367 | ROLLING PEBBLES, ISOFORM B |
Ama29368 | |
Ama29369 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama29370 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama29371 | INNEXIN |
Ama29372 | |
Ama29373 | INNEXIN |
Ama29374 | |
Ama29375 | |
Ama293_5db7b01a | THIOPURINE S-METHYLTRANSFERASE |