The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama29051 | PROTEIN CBG10425 |
Ama29052 | PROTEIN CBG10425 |
Ama29053 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama29054 | |
Ama29055 | ZINC FINGER PROTEIN |
Ama29056 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
Ama29057 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
Ama29059 | PUTATIVE-RELATED |
Ama29060 | ARMADILLO SEGMENT POLARITY PROTEIN |
Ama29061 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
Ama29063 | G-PROTEIN COUPLED RECEPTOR |
Ama29064 | |
Ama29065 | |
Ama29066 | TATA-BOX BINDING PROTEIN |
Ama29067 | PLACENTAL PROTEIN 11-RELATED |
Ama29069 | NUCLEAR HORMONE RECEPTOR |
Ama29070 | NUCLEAR HORMONE RECEPTOR |
Ama29071 | ARMADILLO REPEAT-CONTAINING PROTEIN 8 |
Ama29072 | |
Ama29073 | ZINC FINGER PROTEIN |
Ama29074 | UNCHARACTERIZED |
Ama29075 | UNCHARACTERIZED |
Ama29076 | UNCHARACTERIZED |
Ama29077 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama29078 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama29080 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama29081 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
Ama29082 | |
Ama29083 | PUTATIVE-RELATED |
Ama29084 | INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE |
Ama29085 | |
Ama29086 | |
Ama29088 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama29089 | RAS-RELATED PROTEIN RAB |
Ama29092 | BECLIN 1 |
Ama29095 | VESICULAR-FUSION PROTEIN NSF |
Ama29096 | VESICULAR-FUSION PROTEIN NSF |
Ama29097 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A |
Ama29098 | |
Ama290_5db7b01a | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
Ama29102 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
Ama29104 | |
Ama29105 | |
Ama29106 | |
Ama29107 | UBIQUITIN-ACTIVATING ENZYME E1 |
Ama29108 | |
Ama29109 | |
Ama29110 | DED DOMAIN-CONTAINING PROTEIN |
Ama29111 | |
Ama29113 | CARDIOACCELERATORY PEPTIDE RECEPTOR-RELATED |