The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama28850 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama28852 | |
Ama28855 | |
Ama28857 | HISTIDINE-RICH GLYCOPROTEIN |
Ama28861 | |
Ama28862 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |
Ama28863 | |
Ama28864 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama28865 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama28868 | |
Ama28869 | PUTATIVE-RELATED |
Ama28870 | |
Ama28871 | |
Ama28873 | |
Ama28874 | |
Ama28875 | |
Ama28877 | |
Ama28878 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama28879 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama28880 | |
Ama28881 | INHIBITOR OF APOPTOSIS |
Ama28882 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama28883 | GAMMA GLUTAMYL TRANSPEPTIDASE |
Ama28884 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama28885 | GAMMA GLUTAMYL TRANSPEPTIDASE |
Ama28886 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama28887 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama28888 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama28889 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama28890 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama28891 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama28892 | |
Ama28893 | |
Ama28894 | |
Ama28896 | G-PROTEIN COUPLED RECEPTOR |
Ama288_5db7b01a | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama28901 | |
Ama28903 | |
Ama28904 | SERINE / THREONINE RACEMASE FAMILY MEMBER |
Ama28905 | SERINE BETA-LACTAMASE-LIKE PROTEIN LACTB, MITOCHONDRIAL |
Ama28906 | SERINE BETA-LACTAMASE-LIKE PROTEIN LACTB, MITOCHONDRIAL |
Ama28907 | |
Ama28908 | MITOGEN-ACTIVATED PROTEIN KINASE |
Ama28910 | TRANSPOSON |
Ama28911 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama28912 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama28913 | |
Ama28915 | ZGC:195170 |
Ama28916 | SI:CH211-108C17.2-RELATED-RELATED |
Ama28917 |