About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama284742',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE
Ama28475ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
Ama28476COILED-COIL DOMAIN-CONTAINING PROTEIN 14
Ama28478KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Ama28479RIBONUCLEASE P SUBUNIT P25
Ama28480CYTOCHROME C OXIDASE ASSEMBLY FACTOR 1 HOMOLOG
Ama28481-
Ama28482DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Ama28483DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Ama28484DYNEIN HEAVY CHAIN
Ama28485DYNEIN HEAVY CHAIN
Ama28486DYNEIN HEAVY CHAIN
Ama28487DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Ama28489VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT
Ama28490SERINE-THREONINE PROTEIN KINASE
Ama28491ENDONUCLEASE-RELATED
Ama28492RETINOL-BINDING PROTEIN 4
Ama28493NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Ama28495
Ama2849652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama28497
Ama28498
Ama28499CROSSVEINLESS 2
Ama28501
Ama2850252 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama2850352 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama28505UNCHARACTERIZED
Ama28508
Ama28509
Ama28510CARNOSINE SYNTHASE 1
Ama28511
Ama28513CHITIN SYNTHASE
Ama28515NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58
Ama28517CHITIN SYNTHASE
Ama28519
Ama28520THAP DOMAIN PROTEIN
Ama28521
Ama28522BONUS, ISOFORM C-RELATED
Ama28523RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 4
Ama28524N-LYSINE METHYLTRANSFERASE KMT5A
Ama28525CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama28527SET DOMAIN-CONTAINING PROTEIN-RELATED
Ama28528
Ama28529SET DOMAIN-CONTAINING PROTEIN-RELATED
Ama28530
Ama28531LATROPHILIN RECEPTOR-LIKE PROTEIN A
Ama28533EGF-LIKE DOMAIN-CONTAINING PROTEIN
Ama28534
Ama28535
Ama28537
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