The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama28144 | ZINC FINGER PROTEIN |
Ama28146 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Ama28147 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama28148 | BONUS, ISOFORM C-RELATED |
Ama28149 | 5'-NUCLEOTIDASE |
Ama28151 | 5'-NUCLEOTIDASE |
Ama28152 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama28153 | UNCHARACTERIZED |
Ama28155 | INHIBITOR OF APOPTOSIS |
Ama28156 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama28157 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
Ama28158 | SEROTONIN N-ACETYLTRANSFERASE |
Ama28161 | UPF0428 PROTEIN CXORF56 |
Ama28162 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Ama28163 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama28164 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Ama28166 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Ama28167 | ABC TRANSPORTER B FAMILY |
Ama28168 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Ama28169 | ABC TRANSPORTER B FAMILY |
Ama28170 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28171 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28172 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28173 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28174 | ZINC FINGER PROTEIN |
Ama28175 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Ama28176 | CYTOSINE DEAMINASE FAMILY MEMBER |
Ama28177 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Ama28179 | BONUS, ISOFORM C-RELATED |
Ama28180 | |
Ama28181 | BONUS, ISOFORM C-RELATED |
Ama28182 | |
Ama28183 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama28184 | |
Ama28186 | |
Ama28188 | UNCHARACTERIZED |
Ama28190 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama28191 | |
Ama28192 | |
Ama28194 | UNCHARACTERIZED |
Ama28195 | |
Ama28196 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Ama28197 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28198 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
Ama28199 | |
Ama281_5db7b01a | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Ama28201 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama28202 | UNCHARACTERIZED |
Ama28203 | NUCLEOPORIN-LIKE PROTEIN 2 |
Ama28205 |