The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama28085 | |
Ama28086 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
Ama28087 | SI:DKEY-31G6.6 |
Ama28088 | IMMUNOGLOBULIN |
Ama28090 | IMMUNOGLOBULIN |
Ama28091 | IMMUNOGLOBULIN |
Ama28092 | IMMUNOGLOBULIN |
Ama28094 | |
Ama28095 | |
Ama28096 | IMMUNOGLOBULIN |
Ama28097 | CONTACTIN 5 |
Ama28098 | IMMUNOGLOBULIN |
Ama28099 | BASIGIN RELATED |
Ama28100 | IMMUNOGLOBULIN |
Ama28101 | IMMUNOGLOBULIN |
Ama28102 | |
Ama28103 | IMMUNOGLOBULIN |
Ama28104 | IMMUNOGLOBULIN |
Ama28105 | IMMUNOGLOBULIN |
Ama28106 | RHO GUANINE EXCHANGE FACTOR-RELATED |
Ama28107 | SEC14 DOMAIN AND SPECTRIN REPEAT-CONTAINING PROTEIN 1 |
Ama28108 | |
Ama28111 | 5'-NUCLEOTIDASE |
Ama28112 | RIBONUCLEASE H1 |
Ama28113 | 5'-NUCLEOTIDASE |
Ama28114 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama28116 | UBIQUITIN-CONJUGATING ENZYME E2 |
Ama28117 | |
Ama28119 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama28120 | |
Ama28121 | ENVOPLAKIN |
Ama28122 | FIBROUS SHEATH INTERACTING PROTEIN 1 |
Ama28123 | |
Ama28124 | |
Ama28125 | |
Ama28126 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama28127 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
Ama28128 | ENVOPLAKIN |
Ama28129 | RIBONUCLEASE Y |
Ama28130 | ENVOPLAKIN |
Ama28132 | |
Ama28133 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28134 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28135 | ABC TRANSPORTER B FAMILY |
Ama28136 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28137 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28138 | |
Ama28140 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama28141 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Ama28142 | ZINC FINGER PROTEIN |