The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama28207 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama28208 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama28209 | CYTOCHROME P450 508A4-RELATED |
Ama28212 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28213 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama28214 | |
Ama28215 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28216 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama28217 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama28219 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama28220 | |
Ama28221 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28222 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
Ama28223 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28224 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama28225 | ABC TRANSPORTER B FAMILY |
Ama28226 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28227 | |
Ama28228 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28229 | ABC TRANSPORTER B FAMILY |
Ama28230 | IP13529P |
Ama28231 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28232 | IP13529P |
Ama28233 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28234 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28235 | |
Ama28237 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28238 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28239 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
Ama28240 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28241 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28242 | |
Ama28243 | |
Ama28244 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28246 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama28247 | |
Ama28248 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Ama28249 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
Ama28250 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
Ama28251 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
Ama28252 | UNCHARACTERIZED |
Ama28253 | |
Ama28254 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama28255 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama28256 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
Ama28257 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama28258 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28259 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama28263 | UNCHARACTERIZED |
Ama28265 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |