The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama28418 | |
Ama28420 | DNAJ HOMOLOG SUBFAMILY C MEMBER 22 |
Ama28421 | - |
Ama28423 | ANION EXCHANGE PROTEIN |
Ama28424 | |
Ama28425 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama28426 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama28427 | |
Ama28428 | SER/THR PROTEIN KINASE ULK4 |
Ama28429 | WNT RELATED |
Ama28430 | WNT RELATED |
Ama28431 | INNEXIN |
Ama28432 | |
Ama28433 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama28434 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
Ama28435 | HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED |
Ama28436 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama28437 | HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED |
Ama28438 | HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED |
Ama28439 | INTEGRATOR COMPLEX SUBUNIT 9 |
Ama28440 | DUF614 FAMILY PROTEIN-RELATED |
Ama28441 | NUCLEAR HORMONE RECEPTOR |
Ama28442 | CYCLIN Y, ISOFORM A |
Ama28443 | |
Ama28444 | TUDOR DOMAIN CONTAINING PROTEIN |
Ama28445 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
Ama28446 | KINESIN-RELATED |
Ama28448 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) |
Ama28449 | ETS |
Ama28452 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
Ama28453 | BAX INHIBITOR-RELATED |
Ama28454 | |
Ama28455 | |
Ama28456 | OXIDASE/PEROXIDASE |
Ama28457 | OXIDASE/PEROXIDASE |
Ama28458 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama28459 | |
Ama28460 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama28461 | |
Ama28462 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama28464 | COLLAGEN ALPHA |
Ama28465 | |
Ama28466 | AMP-BINDING DOMAIN-CONTAINING PROTEIN |
Ama28467 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama28468 | |
Ama28469 | PUTATIVE-RELATED |
Ama28470 | NXPE FAMILY MEMBER |
Ama28471 | AMP-BINDING DOMAIN-CONTAINING PROTEIN |
Ama28472 | COLLAGEN ALPHA |
Ama28473 |