The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama28266 | |
Ama28267 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Ama28268 | G-PROTEIN COUPLED RECEPTOR |
Ama28269 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama28270 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama28271 | |
Ama28272 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama28273 | |
Ama28278 | |
Ama28279 | INHIBITOR OF APOPTOSIS |
Ama28280 | INHIBITOR OF APOPTOSIS |
Ama28281 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Ama28282 | |
Ama28283 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Ama28284 | |
Ama28285 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28286 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama28287 | BONUS, ISOFORM C-RELATED |
Ama28288 | BONUS, ISOFORM C-RELATED |
Ama28289 | |
Ama28290 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama28292 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama28293 | |
Ama28294 | |
Ama28295 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama28296 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama28297 | TITIN |
Ama28299 | |
Ama282_5db7b01a | BROMODOMAIN-CONTAINING PROTEIN 8 |
Ama28300 | TITIN |
Ama28301 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama28302 | |
Ama28303 | IMMUNOGLOBULIN |
Ama28304 | IMMUNOGLOBULIN |
Ama28305 | |
Ama28306 | CAMP-BINDING PROTEIN 1-RELATED |
Ama28307 | |
Ama28308 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama28309 | |
Ama28312 | |
Ama28319 | COLLAGEN ALPHA |
Ama28320 | COLLAGEN ALPHA |
Ama28321 | COLLAGEN ALPHA |
Ama28322 | COLLAGEN ALPHA |
Ama28324 | COLLAGEN ALPHA |
Ama28327 | |
Ama28328 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama28330 | |
Ama28331 | |
Ama28332 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |