The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama27939 | E3 UBIQUITIN-PROTEIN LIGASE TM129 |
Ama27940 | |
Ama27941 | HELIX LOOP HELIX PROTEIN 21-RELATED |
Ama27942 | |
Ama27943 | |
Ama27944 | COILED-COIL DOMAIN-CONTAINING PROTEIN 105 |
Ama27945 | |
Ama27947 | |
Ama27949 | |
Ama27950 | |
Ama27951 | GALACTOCEREBROSIDASE |
Ama27952 | TOL-PAL SYSTEM PROTEIN TOLA |
Ama27953 | UNCHARACTERIZED |
Ama27954 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama27955 | HILLARIN |
Ama27956 | HILLARIN |
Ama27959 | HILLARIN |
Ama27960 | |
Ama27961 | DNA POLYMERASE |
Ama27962 | DNA POLYMERASE |
Ama27963 | |
Ama27964 | ATP-DEPENDENT RNA AND DNA HELICASE |
Ama27965 | CHITINASE |
Ama27966 | CHITINASE |
Ama27967 | SPERMATOGENESIS-ASSOCIATED PROTEIN 24 |
Ama27968 | CHITINASE |
Ama27969 | SPERMATOGENESIS-ASSOCIATED PROTEIN 24 |
Ama27970 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama27971 | |
Ama27972 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama27973 | |
Ama27976 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama27978 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
Ama27980 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
Ama27980.1.5db7de70 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
Ama27981 | CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED |
Ama27982 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama27983 | |
Ama27985 | SOLUTE CARRIER FAMILY 17 |
Ama27986 | SOLUTE CARRIER FAMILY 17 |
Ama27987 | SOLUTE CARRIER FAMILY 17 |
Ama27988 | SOLUTE CARRIER FAMILY 17 |
Ama27989 | SOLUTE CARRIER FAMILY 17 |
Ama27990 | FUCOSE MUTAROTASE |
Ama27991 | TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 |
Ama27992 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama27993 | |
Ama27996 | THAP DOMAIN PROTEIN |
Ama27999 | POLYCYSTIN FAMILY MEMBER |
Ama27_5db7b01a |