The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama27567 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama27568 | |
Ama27569 | WD40 REPEAT PROTEIN |
Ama27570 | ACTIN |
Ama27571 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama27572 | SMC5-SMC6 COMPLEX LOCALIZATION FACTOR 2 |
Ama27573 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
Ama27574 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
Ama27575 | GH10160P |
Ama27576 | PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED |
Ama27577 | |
Ama27578 | ACTIN |
Ama27579 | OS12G0117600 PROTEIN |
Ama27580 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
Ama27582 | TRANSFERRIN |
Ama27583 | GALACTOCEREBROSIDASE |
Ama27584 | GALACTOCEREBROSIDASE |
Ama27585 | THAP DOMAIN PROTEIN |
Ama27586 | THAP DOMAIN PROTEIN |
Ama27587 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama27588 | NEUROPEPTIDE Y RECEPTOR |
Ama27589 | CYTOCHROME P450 26 |
Ama27590 | LEUCINE AMINOPEPTIDASE-RELATED |
Ama27592 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
Ama27593 | |
Ama27594 | |
Ama27595 | |
Ama27596 | CENTROSOMAL PROTEIN OF 55 KDA |
Ama27597 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama27598 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama275_5db7b01a | LIM DOMAIN KINASE 1 |
Ama27600 | PROTEIN CBG26694 |
Ama27601 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama27603 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama27604 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama27606 | SH2 DOMAIN CONTAINING PROTEIN |
Ama27607 | |
Ama27608 | |
Ama27609 | |
Ama27610 | |
Ama27611 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT |
Ama27612 | |
Ama27613 | |
Ama27614 | UNCHARACTERIZED |
Ama27615 | SIDEROFLEXIN |
Ama27617 | HOMEOBOX PROTEIN EMX-RELATED |
Ama27618 | HOMEOBOX PROTEIN EMX-RELATED |
Ama27622 | |
Ama27623 | |
Ama27625 |