The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama27106 | |
Ama27107 | TRANSMEMBRANE PROTEIN WITH METALLOPHOSPHOESTERASE DOMAIN-RELATED |
Ama27108 | MICROSPHERULE PROTEIN 1 |
Ama27109 | CEREBELLIN-RELATED |
Ama27110 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama27111 | |
Ama27112 | ORGANIC SOLUTE TRANSPORTER-RELATED |
Ama27115 | |
Ama27116 | RHO GDP-DISSOCIATION INHIBITOR |
Ama27117 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama27119 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
Ama27122 | |
Ama27124 | HEAT SHOCK PROTEIN 70KDA |
Ama27126 | MICROSPHERULE PROTEIN 1 |
Ama27127 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama27128 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama27129 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama27130 | UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 |
Ama27132 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama27134 | |
Ama27135 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama27136 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama27137 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama27142 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama27143 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
Ama27144 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
Ama27145 | RNA POLYMERASE II-ASSOCIATED PROTEIN 3 |
Ama27146 | PUTATIVE-RELATED |
Ama27147 | ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN |
Ama27148 | PUTATIVE-RELATED |
Ama27149 | MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED |
Ama27153 | TRANSMEMBRANE PROTEIN 163 |
Ama27154 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama27155 | INHIBITOR OF APOPTOSIS |
Ama27156 | |
Ama27158 | AMMONIUM TRANSPORTER |
Ama27160 | GUANYLYL CYCLASE |
Ama27161 | |
Ama27162 | SYNAPTOTAGMIN |
Ama27163 | |
Ama27164 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
Ama27165 | RING ZINC FINGER PROTEIN |
Ama27166 | MYOSIN LIGHT CHAIN 1, 3 |
Ama27167 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama27168 | AGAP001331-PA-RELATED |
Ama27169 | |
Ama27170 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
Ama27171 | HILLARIN |
Ama27172 | ARRESTIN DOMAIN CONTAINING PROTEIN |
Ama27173 | REGULATOR OF CHROMOSOME CONDENSATION |