The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama26775 | IDURONATE 2-SULFATASE |
Ama26776 | IDURONATE 2-SULFATASE |
Ama26777 | IDURONATE 2-SULFATASE |
Ama26778 | REVERSE TRANSCRIPTASES |
Ama26779 | CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR |
Ama26780 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama26781 | |
Ama26782 | OPSIN |
Ama26783 | ZINC FINGER PROTEIN 142 |
Ama26784 | ZINC FINGER PROTEIN |
Ama26785 | |
Ama26786 | HELICASE WITH DEATH DOMAIN-RELATED |
Ama26787 | PEPTIDOGLYCAN RECOGNITION PROTEIN |
Ama26788 | SET DOMAIN PROTEINS |
Ama26790 | |
Ama26791 | RAN BINDING PROTEIN |
Ama26793 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama26794 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama26795 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama26796 | |
Ama26798 | NEUROPEPTIDE Y RECEPTOR |
Ama26799 | PROTEIN CBG22215 |
Ama267_5db7b01a | |
Ama26800 | 39S RIBOSOMAL PROTEIN L43 |
Ama26801 | |
Ama26802 | ZINC FINGER PROTEIN |
Ama26803 | G-PROTEIN COUPLED RECEPTOR |
Ama26804 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26805 | |
Ama26806 | BONUS, ISOFORM C-RELATED |
Ama26807 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama26808 | SORTILIN RELATED |
Ama26809 | ZINC FINGER PROTEIN |
Ama26810 | INHIBITOR OF APOPTOSIS |
Ama26811 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama26812 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama26813 | |
Ama26815 | IDURONATE 2-SULFATASE |
Ama26816 | SYNTAXIN-18 |
Ama26817 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
Ama26818 | CELL DIVISION CYCLE 16,23,27 |
Ama26819 | WD REPEAT-CONTAINING PROTEIN 55 |
Ama26820 | UNCHARACTERIZED |
Ama26821 | |
Ama26822 | SARCOMA ANTIGEN NY-SAR-23 |
Ama26824 | |
Ama26825 | REVERSE TRANSCRIPTASES |
Ama26829 | CADHERIN-87A |
Ama26830 | |
Ama26831 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |