The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama26330 | HISTONE RNA HAIRPIN-BINDING PROTEIN |
Ama26331 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama26334 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama26336 | ZINC FINGER PROTEIN |
Ama26337 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
Ama26338 | SCHLAFEN |
Ama26339 | |
Ama26340 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
Ama26341 | L-COA N-ACYLTRANSFERASE-RELATED |
Ama26342 | SWI5-DEPENDENT RECOMBINATION DNA REPAIR PROTEIN 1 HOMOLOG |
Ama26343 | |
Ama26344 | PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5 |
Ama26345 | |
Ama26354 | LITHOSTATHINE |
Ama26356 | ARL14 EFFECTOR PROTEIN |
Ama26357 | PUTATIVE-RELATED |
Ama26358 | |
Ama26359 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26360 | |
Ama26362 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama26363 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama26364 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
Ama26365 | AGAP001623-PA |
Ama26366 | AGAP001623-PA |
Ama26367 | ZIPPER PUTATIVE TUMOR SUPPRESSOR 2 HOMOLOG-LIKE PROTEIN-RELATED |
Ama26371 | |
Ama26372 | |
Ama26373 | BASIGIN RELATED |
Ama26374 | |
Ama26378 | |
Ama26381 | |
Ama26382 | 40S RIBOSOMAL PROTEIN S6 |
Ama26383 | MACROGLOBULIN / COMPLEMENT |
Ama26384 | MACROGLOBULIN / COMPLEMENT |
Ama26385 | |
Ama26386 | PEPTIDE N-GLYCANASE PNGASE -RELATED |
Ama26387 | |
Ama26388 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama26390 | - |
Ama26393 | SODIUM/CALCIUM EXCHANGER |
Ama26395 | SODIUM/CALCIUM EXCHANGER |
Ama26397 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama263_5db7b01a | |
Ama26400 | STEROL DESATURASE |
Ama26401 | ADULT RETINA PROTEIN |
Ama26404 | BIORIENTATION OF CHROMOSOMES IN CELL DIVISION 1 FAMILY MEMBER |
Ama26406 | |
Ama26408 | |
Ama26409 | |
Ama26411 |