The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama26255 | |
Ama26257 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama26259 | |
Ama26260 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
Ama26261 | |
Ama26262 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama26264 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama26266 | |
Ama26267 | EXPRESSED PROTEIN |
Ama26268 | DELTEX-RELATED |
Ama26270 | |
Ama26273 | - |
Ama26276 | CLARIN |
Ama26278 | HIGH MOBILITY GROUP PROTEIN 2 |
Ama26279 | SIGNAL RECOGNITION PARTICLE 72 |
Ama26280 | ZINC FINGER PROTEIN |
Ama26281 | NUCLEAR RECEPTOR BINDING FACTOR 2 |
Ama26286 | |
Ama26287 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama26288 | |
Ama26289 | |
Ama26290 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama26291 | DELTEX-RELATED |
Ama26293 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama26294 | RHO FAMILY GTPASE |
Ama26295 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama26296 | ASPARTATE AMINOTRANSFERASE |
Ama26297 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama26298 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
Ama26299 | |
Ama262_5db7b01a | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Ama26300 | HUNTINGTON DISEASE PROTEIN |
Ama26301 | HUNTINGTON DISEASE PROTEIN |
Ama26302 | PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED |
Ama26305 | HILLARIN |
Ama26306 | |
Ama26307 | PUTATIVE-RELATED |
Ama26308 | |
Ama26310 | TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER |
Ama26312 | NEUROPEPTIDE Y RECEPTOR |
Ama26313 | |
Ama26318 | |
Ama26319 | |
Ama26321 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama26322 | RING ZINC FINGER PROTEIN |
Ama26324 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
Ama26325 | AMINOTRANSFERASE CLASS III |
Ama26326 | |
Ama26328 | |
Ama26329 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |