The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama25880 | PROTEIN CBG23766 |
Ama25881 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama25882 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama25883 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
Ama25884 | AAA DOMAIN-CONTAINING |
Ama25886 | TRANSMEMBRANE PROTEIN |
Ama25888 | |
Ama25889 | DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED |
Ama25891 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama25893 | HILLARIN |
Ama25895 | F-BOX/WD REPEAT-CONTAINING PROTEIN 5 |
Ama25896 | F-BOX/WD REPEAT-CONTAINING PROTEIN 5 |
Ama25897 | AHD DOMAIN-CONTAINING PROTEIN |
Ama25898 | GENE, 32742-RELATED-RELATED |
Ama25899 | GENE 9195-RELATED-RELATED |
Ama25903 | LEUCINE ZIPPER PROTEIN 4-RELATED |
Ama25904 | GENE, 32742-RELATED-RELATED |
Ama25907 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Ama25908 | |
Ama25910 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINAL |
Ama25911 | MOLTING PROTEIN MLT-4 |
Ama25912 | VERTNIN |
Ama25913 | |
Ama25914 | SERINE/THREONINE-PROTEIN KINASE PIM |
Ama25915 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama25916 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
Ama25919 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama25920 | |
Ama25921 | MACROGLOBULIN / COMPLEMENT |
Ama25922 | |
Ama25923 | |
Ama25928 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama25929 | CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1 |
Ama25930 | TYROSINE-PROTEIN KINASE |
Ama25932 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
Ama25934 | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
Ama25935 | CENTLEIN |
Ama25936 | |
Ama25937 | DISCONNECTED-RELATED |
Ama25940 | CONTACTIN 5 |
Ama25941 | - |
Ama25942 | MATRIX PROTEIN, PUTATIVE-RELATED |
Ama25944 | RNA-BINDING PROTEIN 8A |
Ama25945 | ODD-SKIPPED - RELATED |
Ama25947 | |
Ama25949 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
Ama25950 | |
Ama25951 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
Ama25952 | FORKHEAD BOX PROTEIN |
Ama25953 | FORKHEAD BOX PROTEIN |