The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama25390 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama25391 | TATA-BOX BINDING PROTEIN |
Ama25392 | |
Ama25393 | |
Ama25394 | |
Ama25395 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama25397 | PREFOLDIN SUBUNIT 5 |
Ama25398 | INHIBITOR OF APOPTOSIS |
Ama25399 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama253_5db7b01a | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 |
Ama25400 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama25401 | |
Ama25402 | SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1 |
Ama25403 | |
Ama25404 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
Ama25405 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
Ama25406 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Ama25407 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
Ama25408 | |
Ama25409 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
Ama25410 | DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER |
Ama25418 | G-PROTEIN COUPLED RECEPTOR |
Ama25420 | |
Ama25421 | |
Ama25428 | POS9-ACTIVATING FACTOR FAP7-RELATED |
Ama25429 | IMPORTIN-7, 8, 11 |
Ama25430 | |
Ama25431 | |
Ama25432 | RNA POLYMERASE III DNA DIRECTED -RELATED |
Ama25433 | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS |
Ama25434 | |
Ama25435 | TRANSPOSON |
Ama25436 | |
Ama25437 | TRANSPOSON |
Ama25438 | |
Ama25439 | URIDINE KINASE |
Ama25440 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
Ama25442 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama25443 | DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED |
Ama25444 | |
Ama25445 | |
Ama25446 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama25447 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
Ama25448 | |
Ama25449 | KINESIN-RELATED PROTEIN 6 |
Ama25450 | |
Ama25452 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama25454 | |
Ama25455 | |
Ama25456 | DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED |