The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24953 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE DSOR1-LIKE PROTEIN |
Ama24955 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
Ama24957 | FRUCTOSE-1,6-BISPHOSPHATASE-RELATED |
Ama24958 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama24960 | 60S RIBOSOMAL PROTEIN L36 |
Ama24961 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24962 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama24963 | TETRASPANIN |
Ama24964 | CYTOSOLIC CARBOXYPEPTIDASE |
Ama24966 | HILLARIN |
Ama24967 | M7GPPPN-MRNA HYDROLASE |
Ama24968 | M7GPPPN-MRNA HYDROLASE |
Ama24970 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
Ama24971 | REGUCALCIN |
Ama24972 | SORBITOL DEHYDROGENASE |
Ama24973 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama24974 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama24975 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama24976 | OXIDASE/PEROXIDASE |
Ama24977 | UBIQUITIN THIOESTERASE |
Ama24979 | POLY A POLYMERASE CID PAP -RELATED |
Ama24980 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
Ama24981 | ARRESTIN DOMAIN CONTAINING PROTEIN |
Ama24982 | PROTEIN CBG22215 |
Ama24984 | TPR REPEAT CONTAINING PROTEIN |
Ama24985 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama24986 | OS02G0815200 PROTEIN |
Ama24987 | TRANSPOSON |
Ama24988 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Ama24989 | |
Ama24992 | GUANYLYL CYCLASE |
Ama24993 | CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 |
Ama24994 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama24995 | PROTEIN FAM221A-RELATED |
Ama24996 | |
Ama24997 | BETA-AMYLOID BINDING PROTEIN-RELATED |
Ama24999 | PROTEIN UNC-13 HOMOLOG |
Ama24_5db7b01a | N-MYC DOWNSTREAM REGULATED |
Ama24_5db84494 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama25000 | |
Ama25001 | PROTEIN CBG17025 |
Ama25002 | PROTEIN UNC-13 HOMOLOG |
Ama25003 | PROTEIN UNC-13 HOMOLOG |
Ama25004 | |
Ama25006 | PROTEIN UNC-13 HOMOLOG |
Ama25008 | |
Ama25009 | MULTI-COPPER OXIDASE |
Ama25010 | GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN |
Ama25011 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama25012 | REVERSE TRANSCRIPTASES |