The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama25154 | PUTATIVE-RELATED |
Ama25155 | |
Ama25156 | HILLARIN |
Ama25158 | CERAMIDE GLUCOSYLTRANSFERASE |
Ama25160 | |
Ama25161 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama25163 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
Ama25164 | NO EXINE FORMATION 1 |
Ama25165 | ZINC FINGER PROTEIN AEBP2 |
Ama25166 | OXIDOREDUCTASE NAD-BINDING DOMAIN-CONTAINING PROTEIN 1 |
Ama25167 | |
Ama25170 | DYNEIN ASSEMBLY FACTOR 4, AXONEMAL |
Ama25171 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
Ama25172 | CYSTEINE-RICH, ACIDIC INTEGRAL MEMBRANE PROTEIN-RELATED |
Ama25173 | DNA HELICASE RECQ FAMILY MEMBER |
Ama25174 | |
Ama25175 | |
Ama25176 | GLYCOSYLATED LYSOSOMAL MEMBRANE PROTEIN |
Ama25178 | CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 1 |
Ama25179 | |
Ama25180 | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA |
Ama25181 | PERILIPIN |
Ama25182 | GLUTAREDOXIN 2 |
Ama25183 | GLUTAREDOXIN 2 |
Ama25184 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama25185 | |
Ama25186 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama25188 | DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED |
Ama25190 | |
Ama25191 | METAXIN RELATED |
Ama25192 | METHYLMALONYL-COA EPIMERASE |
Ama25194 | REPRESSOR OF YIELD OF DENV PROTEIN |
Ama25195 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama25196 | RIBOSOME RECYCLING FACTOR |
Ama25197 | TRANSPOSABLE ELEMENT-RELATED |
Ama25198 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
Ama25202 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
Ama25203 | KELCH PROTEIN |
Ama25204 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Ama25205 | |
Ama25206 | YALI0E18722P |
Ama25207 | LEUCOKININ RECEPTOR-RELATED |
Ama25208 | THYROTROPIN-RELEASING HORMONE RECEPTOR |
Ama25210 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Ama25213 | COATOMER SUBUNIT EPSILON |
Ama25214 | |
Ama25215 | |
Ama25216 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama25217 | |
Ama25219 | I[[H]] CHANNEL, ISOFORM E |