The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama25220 | EXPRESSED PROTEIN |
Ama25221 | |
Ama25222 | |
Ama25223 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama25224 | |
Ama25225 | INTEGRIN ALPHA |
Ama25226 | |
Ama25227 | |
Ama25233 | |
Ama25234 | |
Ama25235 | ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 |
Ama25236 | |
Ama25237 | MUTATED IN BLADDER CANCER 1 |
Ama25238 | METHYL-CPG BINDING PROTEIN, MBD |
Ama25239 | |
Ama25240 | |
Ama25241 | |
Ama25242 | |
Ama25244 | |
Ama25245 | INHIBITOR OF APOPTOSIS |
Ama25247 | |
Ama25248 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama25251 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
Ama25252 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama25254 | ZINC/IRON TRANSPORTER |
Ama25257 | SHC TRANSFORMING PROTEIN |
Ama25263 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
Ama25264 | POTASSIUM CHANNEL, SUBFAMILY K |
Ama25266 | FRATAXIN |
Ama25267 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S30/P52 PRO-APOTOTIC PROTEIN |
Ama25268 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S30/P52 PRO-APOTOTIC PROTEIN |
Ama25269 | GUSTATORY RECEPTOR |
Ama25270 | BILIVERDIN REDUCTASE A |
Ama25271 | FMRFAMIDE RECEPTOR-RELATED |
Ama25272 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama25273 | |
Ama25275 | POTASSIUM CHANNEL, SUBFAMILY K |
Ama25276 | |
Ama25278 | |
Ama25280 | 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE |
Ama25281 | BTB/POZ DOMAIN-CONTAINING |
Ama25282 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT |
Ama25284 | |
Ama25286 | SPORE COAT PROTEIN SP85 |
Ama25290 | ELONGATION FACTOR TU-RELATED |
Ama25291 | WDR41-RELATED |
Ama25292 | |
Ama25293 | |
Ama25294 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama25297 |