The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
| Gene ID | Description |
|---|---|
| Ama25457 | |
| Ama25458 | HILLARIN |
| Ama25460 | |
| Ama25461 | |
| Ama25462 | |
| Ama25463 | POLYCOMB GROUP PROTEIN |
| Ama25464 | |
| Ama25466 | - |
| Ama25469 | |
| Ama25470 | VERTNIN |
| Ama25472 | |
| Ama25473 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| Ama25474 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
| Ama25475 | |
| Ama25476 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
| Ama25479 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
| Ama25480 | |
| Ama25481 | |
| Ama25482 | |
| Ama25483 | |
| Ama25484 | ENDONUCLEASE-RELATED |
| Ama25485 | |
| Ama25486 | |
| Ama25488 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
| Ama25489 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Ama25490 | |
| Ama25494 | |
| Ama25499 | |
| Ama254_5db7b01a | - |
| Ama25503 | |
| Ama25504 | |
| Ama25505 | |
| Ama25507 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Ama25508 | KERATINOCYTE-ASSOCIATED PROTEIN 2 |
| Ama25509 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| Ama25510 | TRANSPOSON |
| Ama25511 | LD44032P |
| Ama25512 | ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 15 |
| Ama25513 | UNCHARACTERIZED |
| Ama25514 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
| Ama25515 | ACID PHOSPHATASE-RELATED |
| Ama25516 | PUTATIVE-RELATED |
| Ama25517 | |
| Ama25518 | NEUROTRANSMITTER GATED ION CHANNEL |
| Ama25519 | EXPANSIN-LIKE PROTEIN 2 |
| Ama25521 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| Ama25522 | |
| Ama25523 | |
| Ama25524 | UNCHARACTERIZED |
| Ama25526 | PUTATIVE-RELATED |
