The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama25704 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama25712 | |
Ama25713 | INHIBITOR OF APOPTOSIS |
Ama25714 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama25715 | |
Ama25716 | BETA-HEXOSAMINIDASE |
Ama25717 | |
Ama25718 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama25722 | |
Ama25723 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
Ama25725 | |
Ama25729 | |
Ama25730 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama25736 | |
Ama25737 | |
Ama25738 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama25739 | PROTEIN CBG22215 |
Ama25740 | ATP-DEPENDENT DNA HELICASE |
Ama25742 | |
Ama25743 | |
Ama25744 | |
Ama25745 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama25750 | |
Ama25752 | |
Ama25756 | |
Ama25757 | |
Ama25758 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama25761 | UBIQUILIN |
Ama25763 | |
Ama25764 | |
Ama25765 | TATA-BOX BINDING PROTEIN |
Ama25766 | INHIBITOR OF APOPTOSIS |
Ama25767 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama25768 | DYNEIN INTERMEDIATE CHAIN |
Ama25788 | |
Ama25790 | SWIM-TYPE DOMAIN-CONTAINING PROTEIN |
Ama25791 | SWIM-TYPE DOMAIN-CONTAINING PROTEIN |
Ama25793 | ALDEHYDE DEHYDROGENASE-RELATED |
Ama25797 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama25799 | AMINO ACID TRANSPORTER |
Ama25800 | |
Ama25801 | |
Ama25805 | |
Ama25806 | |
Ama25807 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama25809 | |
Ama25810 | |
Ama25812 | |
Ama25814 | BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2 |
Ama25815 |