About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama25528RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
Ama25530PROLINE-RICH PROTEIN PRCC
Ama2553160S RIBOSOMAL PROTEIN L4
Ama25532MAHOGUNIN
Ama25533ELECTRON TRANSPORT OXIDOREDUCTASE
Ama25536RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama25538PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Ama25540CEROID-LIPOFUSCINOSIS NEURONAL PROTEIN 6
Ama25544NUCLEAR HORMONE RECEPTOR
Ama25547ATP-DEPENDENT RNA HELICASE
Ama25549ATP-DEPENDENT RNA HELICASE
Ama25550
Ama25551SKI ONCOGENE-RELATED
Ama25553SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Ama25554SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Ama25556ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Ama25560EPOXIDE HYDROLASE
Ama25562
Ama25563GLUTATHIONE S-TRANSFERASE KAPPA
Ama25564UNCHARACTERIZED
Ama25565LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
Ama25567REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Ama25568LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
Ama25569
Ama25572LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
Ama25574WNT RELATED
Ama25577USE1-LIKE PROTEIN
Ama25578TESTIS-EXPRESSED PROTEIN 45
Ama25579CHONDROITIN SYNTHASE
Ama25581CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN
Ama25582COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Ama25583
Ama25584HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Ama25586SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Ama25587
Ama25588UNCHARACTERIZED
Ama25589
Ama25590PUTATIVE-RELATED
Ama25591
Ama25595NEUROBLASTOMA-AMPLIFIED SEQUENCE
Ama25596
Ama25597
Ama25598
Ama25599CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama255_5db7b01aC2H2 ZINC FINGER CGI-62-RELATED
Ama25600DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG
Ama25611SRCR DOMAIN-CONTAINING PROTEIN
Ama25613ADP-DEPENDENT GLUCOKINASE
Ama25615BONUS, ISOFORM C-RELATED
Ama25616SET DOMAIN-CONTAINING PROTEIN-RELATED
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