About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama25617SRCR DOMAIN-CONTAINING PROTEIN
Ama25619SRCR DOMAIN-CONTAINING PROTEIN
Ama25620CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER
Ama25621
Ama25622
Ama25628RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama25629INHIBITOR OF APOPTOSIS
Ama25630INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Ama25631RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama25632UNCHARACTERIZED
Ama25639INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Ama25640
Ama25641SOLUTE CARRIER FAMILY 22 MEMBER
Ama25642
Ama25643PUTATIVE-RELATED
Ama25644
Ama25646ADENOSINE KINASE
Ama25647THAP DOMAIN PROTEIN
Ama25648ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Ama25649REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Ama25650
Ama25651
Ama25652INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Ama25653INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Ama25654
Ama25655PROTEIN CBG10425
Ama25656
Ama25657
Ama25658
Ama25659UNCHARACTERIZED
Ama25660F-BOX ONLY PROTEIN 33
Ama25661DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Ama25664ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama2566540S RIBOSOMAL PROTEIN S17
Ama25668
Ama25671
Ama25672BLOM7
Ama25673CYTOCHROME P450 FAMILY 4
Ama25675
Ama25676REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama25677PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama25678CYCLINS
Ama25686NEUROTRANSMITTER GATED ION CHANNEL
Ama25687
Ama25688
Ama25692
Ama25693
Ama25694
Ama256_5db7b01a
Ama25703
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