The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama25954 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama25955 | |
Ama25956 | |
Ama25963 | TRANSPOSON |
Ama25966 | DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED |
Ama25969 | |
Ama25978 | |
Ama25979 | MEVALONATE KINASE/GALACTOKINASE |
Ama25980 | RIIA DOMAIN-CONTAINING PROTEIN 1 |
Ama25981 | ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE |
Ama25983 | HISTONE H3 |
Ama25984 | HISTONE H2A |
Ama25985 | |
Ama25986 | HISTONE H4 |
Ama25987 | HISTONE H2A |
Ama25988 | HISTONE H2B |
Ama25989 | HISTONE H2A |
Ama25990 | HISTONE H3 |
Ama25991 | HISTONE H3 |
Ama25992 | HISTONE H1 |
Ama25993 | HISTONE H2A |
Ama25994 | |
Ama25995 | |
Ama25996 | |
Ama25997 | |
Ama25998 | |
Ama25999 | SERINE/THREONINE-PROTEIN KINASE PIM |
Ama259_5db7b01a | |
Ama26000 | |
Ama26001 | |
Ama26002 | HISTONE H3 |
Ama26003 | HISTONE H3 |
Ama26004 | - |
Ama26005 | HISTONE H1 |
Ama26006 | HISTONE H3 |
Ama26007 | HISTONE H2B |
Ama26008 | HISTONE H3 |
Ama26010 | |
Ama26011 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26012 | FORKHEAD BOX PROTEIN |
Ama26013 | |
Ama26014 | AP-5 COMPLEX SUBUNIT BETA-1 |
Ama26015 | |
Ama26016 | TRANSDUCIN-LIKE ENHANCER PROTEIN |
Ama26018 | INTEGRATOR COMPLEX SUBUNIT 3 |
Ama26021 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
Ama26022 | CREB-REGULATED TRANSCRIPTION COACTIVATOR |
Ama26024 | UNNAMED PRODUCT |
Ama26025 | UNNAMED PRODUCT |
Ama26028 | PROTEIN SIDEKICK |