The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama26105 | |
Ama26106 | |
Ama26107 | ORGANIC ANION TRANSPORTER |
Ama26108 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama26109 | |
Ama26110 | RRM DOMAIN-CONTAINING PROTEIN |
Ama26112 | |
Ama26114 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama26120 | CALPAIN |
Ama26121 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama26122 | VILLIN |
Ama26123 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama26124 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama26126 | SERINE/THREONINE-PROTEIN KINASE |
Ama26127 | NADH-UBIQUINONE OXIDOREDUCTASE |
Ama26128 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama26129 | - |
Ama26131 | FMRFAMIDE RECEPTOR-RELATED |
Ama26132 | TELO2-INTERACTING PROTEIN 2 |
Ama26133 | ZINC/IRON TRANSPORTER |
Ama26134 | AP COMPLEX SUBUNIT MU |
Ama26135 | |
Ama26136 | |
Ama26137 | |
Ama26139 | POTASSIUM CHANNEL, SUBFAMILY K |
Ama26140 | MIR-INTERACTING SAPOSIN-LIKE PROTEIN |
Ama26141 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
Ama26143 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
Ama26147 | AGAP009604-PA |
Ama26149 | UNCHARACTERIZED |
Ama26150 | SOLUTE CARRIER FAMILY 17 |
Ama26151 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama26152 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama26153 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama26154 | |
Ama26155 | AGAP011099-PA |
Ama26156 | MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE |
Ama26157 | RAS GTPASE-ACTIVATING PROTEINS |
Ama26160 | 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED |
Ama26163 | SER/THR-PROTEIN KINASE RIO2 |
Ama26164 | C2H2 ZINC FINGER CGI-62-RELATED |
Ama26165 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
Ama26166 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama26167 | |
Ama26168 | NUDIX HYDROLASE, NUDC SUBFAMILY |
Ama26169 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama26170 | |
Ama26171 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama26172 | NUDIX HYDROLASE, NUDC SUBFAMILY |
Ama26173 |