About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama26035HOMEOBOX PROTEIN ARISTALESS
Ama26037BETA TRANSDUCIN-RELATED PROTEIN
Ama26038PUTATIVE-RELATED
Ama26040COPPER AMINE OXIDASE
Ama26041TRANSPOSABLE ELEMENT-RELATED
Ama26042
Ama26043LEUCINE-RICH REPEAT-CONTAINING
Ama26044
Ama26046
Ama26049TIMELESS INTERACTING-RELATED
Ama26050GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
Ama26051HEAVYWEIGHT, ISOFORM A
Ama26052P300 TRANSCRIPTIONAL COFACTOR JMY-RELATED
Ama26053
Ama26054SRCR DOMAIN-CONTAINING PROTEIN
Ama26055ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
Ama26056
Ama26057NADH DEHYDROGENASE
Ama26058RIBOSOMAL PROTEIN S19P FAMILY MEMBER
Ama26059DENN DOMAIN-CONTAINING PROTEIN 4
Ama26064DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Ama26065
Ama26066ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
Ama26067HISTONE H1
Ama26068CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama26069
Ama26070HISTONE H1
Ama26071TRANSPOSON
Ama26072YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER
Ama26076HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Ama26077UNCHARACTERIZED
Ama26078
Ama26080HILLARIN
Ama26081TRANSPOSABLE ELEMENT-RELATED
Ama26082SAM DOMAIN-CONTAINING PROTEIN-RELATED
Ama26083
Ama26084NEUROTRANSMITTER GATED ION CHANNEL
Ama26085HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
Ama2608626S PROTEASOME REGULATORY SUBUNIT
Ama26087
Ama26088
Ama26091UNCHARACTERIZED
Ama26096
Ama26097ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Ama26098MOLTING PROTEIN MLT-4
Ama26099UBIQUITIN-CONJUGATING ENZYME E2
Ama260_5db7b01aSEC14 RELATED PROTEIN
Ama26100RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Ama26101DEATH DOMAIN-CONTAINING PROTEIN
Ama26104SI:CH211-108C17.2-RELATED-RELATED
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