The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24825 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama24826 | |
Ama24829 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Ama24830 | |
Ama24831 | PR DOMAIN ZINC FINGER PROTEIN |
Ama24832 | |
Ama24833 | UNCHARACTERIZED |
Ama24834 | F-BOX ONLY PROTEIN 4 |
Ama24835 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
Ama24836 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
Ama24838 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama24839 | |
Ama24840 | REVERSE TRANSCRIPTASES |
Ama24841 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Ama24842 | ZINC FINGER CCHC DOMAIN-CONTAINING |
Ama24843 | SURVIVAL MOTOR NEURON-LIKE PROTEIN 1 |
Ama24844 | ZINC FINGER PROTEIN |
Ama24845 | ZINC FINGER PROTEIN |
Ama24846 | SURVIVAL MOTOR NEURON-LIKE PROTEIN 1 |
Ama24849 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
Ama24852 | BILE ACID BETA-GLUCOSIDASE-RELATED |
Ama24853 | PUTATIVE-RELATED |
Ama24854 | |
Ama24855 | G-PROTEIN COUPLED RECEPTOR |
Ama24856 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama24857 | |
Ama24859 | |
Ama24861 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Ama24862 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 9 ZCCHC9 |
Ama24863 | CAP BINDING PROTEIN |
Ama24864 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
Ama24865 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
Ama24868 | |
Ama24871 | SH3 DOMAIN-CONTAINING |
Ama24873 | |
Ama24875 | |
Ama24876 | |
Ama24877 | |
Ama24878 | UNCHARACTERIZED |
Ama24879 | |
Ama24880 | |
Ama24881 | EGALITARIAN, ISOFORM B |
Ama24882 | |
Ama24883 | SORTING NEXIN 17 AND 27 |
Ama24884 | GAMMA TUBULIN COMPLEX PROTEIN |
Ama24885 | AGAP007537-PB |
Ama24887 | TRANSPOSABLE ELEMENT-RELATED |
Ama24894 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama24895 | |
Ama24897 | RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1 |