The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama24410 | SERINE INCORPORATOR |
Ama24411 | SERINE INCORPORATOR |
Ama24412 | DIADENOSINE 5,5-P1,P4-TETRAPHOSPHATE PYROPHOSPHOHYDROLASE MUTT |
Ama24413 | |
Ama24414 | |
Ama24415 | DNA-DIRECTED RNA POLYMERASE III |
Ama24416 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED |
Ama24417 | THYROID RECEPTOR INTERACTING PROTEIN RELATED |
Ama24418 | |
Ama24423 | KINESIN LIGHT CHAIN |
Ama24424 | |
Ama24425 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama24426 | TRANSLATION ELONGATION FACTOR-RELATED |
Ama24427 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama24430 | HOMEOBOX PROTEIN ORTHOPEDIA |
Ama24431 | HOMEOBOX PROTEIN ORTHOPEDIA |
Ama24432 | HOMEOBOX PROTEIN ORTHOPEDIA |
Ama24435 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 |
Ama24436 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Ama24437 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT J |
Ama24438 | THYROTROPIN-RELEASING HORMONE RECEPTOR |
Ama24440 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24441 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24442 | - |
Ama24443 | - |
Ama24444 | DNA POLYMERASE SUBUNIT GAMMA-1 |
Ama24445 | |
Ama24450 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama24451 | G-PROTEIN COUPLED RECEPTOR |
Ama24452 | PEROXISOMAL SARCOSINE OXIDASE |
Ama24453 | PEROXISOMAL SARCOSINE OXIDASE |
Ama24454 | GLUTAREDOXIN-LIKE PROTEIN C5ORF63 HOMOLOG |
Ama24457 | TUBULIN POLYGLUTAMYLASE |
Ama24462 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13B |
Ama24463 | |
Ama24464 | STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL |
Ama24467 | C2 DOMAIN-CONTAINING PROTEIN |
Ama24470 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
Ama24471 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama24472 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
Ama24476 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama24477 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama24478 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
Ama24480 | |
Ama24481 | PROTEIN DISULFIDE ISOMERASE |
Ama24482 | |
Ama24483 | |
Ama24489 | |
Ama24491 | ARRESTIN DOMAIN CONTAINING PROTEIN |
Ama24492 |