The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23941 | ETS |
Ama23943 | |
Ama23944 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Ama23945 | CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED |
Ama23946 | |
Ama23947 | |
Ama23948 | OS06G0237300 PROTEIN |
Ama23949 | PROTEIN ARGININE N-METHYLTRANSFERASE |
Ama23950 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama23951 | TRANSMEMBRANE 7 SUPERFAMILY MEMBER 3 |
Ama23952 | SIKE FAMILY MEMBER |
Ama23953 | INTEGRIN ALPHA REPEAT DOMAIN-CONTAINING |
Ama23955 | |
Ama23958 | |
Ama23959 | PEROXISOMAL MEMBRANE PROTEIN 4 |
Ama23960 | |
Ama23961 | |
Ama23962 | |
Ama23967 | UNCHARACTERIZED |
Ama23968 | |
Ama23969 | SOLUTE CARRIER FAMILY 39 |
Ama23973 | DEATH EFFECTOR DOMAIN-CONTAINING PROTEIN |
Ama23976 | NUCLEAR SPECKLE SPLICING REGULATORY PROTEIN 1 |
Ama23980 | SCAVENGER RECEPTOR CLASS F |
Ama23981 | |
Ama23987 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
Ama23989 | LD39211P |
Ama23990 | COLLAGEN ALPHA |
Ama23991 | LD39211P |
Ama23992 | |
Ama23993 | MITOTIC-SPINDLE ORGANIZING PROTEIN 1 |
Ama23994 | UNCHARACTERIZED |
Ama23996 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Ama23999 | |
Ama239_5db7b01a | CHAPERONE ATP11 |
Ama23_5db7b01a | |
Ama24000 | BONUS, ISOFORM C-RELATED |
Ama24001 | ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED |
Ama24004 | SOLUTE CARRIER FAMILY 39 |
Ama24007 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama24008 | F20B24.22 |
Ama24012 | DOPAMINE BETA HYDROXYLASE RELATED |
Ama24013 | OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTC |
Ama24015 | TRANSPOSABLE ELEMENT-RELATED |
Ama24016 | NUCLEOTIDYLTRANSFERASE |
Ama24017 | NUCLEOTIDYLTRANSFERASE |
Ama24018 | HCG1796489 |
Ama24019 | ACETYL-COA C-ACYLTRANSFERASE |
Ama24021 | |
Ama24022 |