About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama23601
Ama23602NUCLEOTIDE KINASE
Ama23604GPI-ANCHOR TRANSAMIDASE
Ama23605SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52
Ama2360630S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18
Ama23607ROLLING PEBBLES, ISOFORM B
Ama23608ANKYRIN REPEAT FAMILY PROTEIN
Ama23610
Ama23612TETRATRICOPEPTIDE REPEAT PROTEIN 16
Ama23613
Ama23615
Ama23616POTE ANKYRIN DOMAIN
Ama23617ANAPHASE-PROMOTING COMPLEX SUBUNIT 2
Ama23618PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Ama23619DELTA-AMINOLEVULINIC ACID DEHYDRATASE
Ama23623PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Ama23625TNF RECEPTOR ASSOCIATED FACTOR
Ama23626
Ama23627
Ama23628THAP DOMAIN PROTEIN
Ama23629ATP-DEPENDENT DNA HELICASE
Ama23632
Ama23633DIAMINE N-ACETYLTRANSFERASE
Ama23634
Ama23635DIAMINE N-ACETYLTRANSFERASE
Ama23636
Ama23637DIAMINE N-ACETYLTRANSFERASE
Ama23638BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Ama23640
Ama23641
Ama23642
Ama23643
Ama23644DIAMINE N-ACETYLTRANSFERASE
Ama23645DIAMINE N-ACETYLTRANSFERASE
Ama23646DIAMINE N-ACETYLTRANSFERASE
Ama23647
Ama23648DIAMINE N-ACETYLTRANSFERASE
Ama23649
Ama23650
Ama23651
Ama23652DIAMINE N-ACETYLTRANSFERASE
Ama23653
Ama23656FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Ama23661
Ama23662
Ama23665
Ama23672SERUM RESPONSE FACTOR-BINDING
Ama23673UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Ama23675HOMER
Ama23678
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