The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23752 | |
Ama23754 | MYOTUBULARIN-RELATED |
Ama23756 | |
Ama23757 | |
Ama23758 | F20B24.22 |
Ama23761 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama23762 | INHIBITOR OF APOPTOSIS |
Ama23765 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama23766 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama23767 | BASIGIN RELATED |
Ama23769 | INHIBITOR OF APOPTOSIS |
Ama23770 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama23771 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
Ama23772 | |
Ama23773 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama23774 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama23775 | INHIBITOR OF APOPTOSIS |
Ama23776 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama23777 | INHIBITOR OF APOPTOSIS |
Ama23779 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama23780 | MACROPHAGE-EXPRESSED GENE 1 PROTEIN |
Ama23781 | RAN BINDING PROTEIN 9-RELATED |
Ama23782 | SERUM AMYLOID A |
Ama23783 | ADAPTER PROTEIN CIKS |
Ama23784 | ADAPTER PROTEIN CIKS |
Ama23785 | PROTEIN KINASE PKN/PRK1, EFFECTOR |
Ama23786 | |
Ama23788 | CALCIUM-BINDING PROTEIN 8-RELATED |
Ama23790 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
Ama23792 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
Ama23793 | SORTING NEXIN |
Ama23795 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Ama23796 | |
Ama23797 | |
Ama23798 | |
Ama23799 | |
Ama237_5db7b01a | |
Ama23801 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama23802 | |
Ama23803 | |
Ama23804 | |
Ama23805 | |
Ama23806 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23809 | LAR INTERACTING PROTEIN LIP -RELATED PROTEIN |
Ama23810 | LAR INTERACTING PROTEIN LIP -RELATED PROTEIN |
Ama23811 | |
Ama23812 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama23813 | |
Ama23814 | MULTICOPPER OXIDASE-RELATED |
Ama23815 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |