The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23481 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama23482 | |
Ama23483 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama23484 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD |
Ama23484.1.5db87aaf | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD |
Ama23485 | |
Ama23487 | CST COMPLEX SUBUNIT TEN1 |
Ama23488 | PROTEASOME ASSEMBLY CHAPERONE 3 |
Ama23489 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1 |
Ama23490 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23491 | |
Ama23492 | FANCONI ANEMIA GROUP E PROTEIN |
Ama23493 | DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED |
Ama23494 | METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE |
Ama23497 | TECTONIC FAMILY MEMBER |
Ama23498 | APOPTOSIS INHIBITOR 5-RELATED |
Ama23499 | CELL CYCLE CONTROL PROTEIN 50 |
Ama234_5db7b01a | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Ama23500 | |
Ama23501 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama23502 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama23503 | |
Ama23504 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama23505 | ZGC:195170 |
Ama23507 | |
Ama23508 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama23509 | |
Ama23510 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama23511 | HL07962P-RELATED |
Ama23513 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama23514 | INHIBITOR OF APOPTOSIS |
Ama23515 | PROTEIN CBG22215 |
Ama23516 | |
Ama23518 | RTDR1 |
Ama23520 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama23521 | CCR4-NOT TRANSCRIPTION COMPLEX RELATED |
Ama23525 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama23526 | |
Ama23527 | |
Ama23528 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23529 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama23530 | COILED-COIL DOMAIN-CONTAINING PROTEIN 91 |
Ama23531 | MIP08469P |
Ama23533 | ECTOPIC P GRANULES PROTEIN 5 HOMOLOG |
Ama23534 | NUCLEOPORIN NUP35 |
Ama23535 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama23536 | ADP-RIBOSYL CYCLASE |
Ama23537 | THAP DOMAIN PROTEIN |
Ama23538 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama23539 |