The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23679 | |
Ama23680 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23682 | THAP DOMAIN PROTEIN |
Ama23683 | ATP-DEPENDENT DNA HELICASE |
Ama23684 | COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN |
Ama23685 | BETA-HEXOSAMINIDASE |
Ama23686 | |
Ama23687 | |
Ama23688 | TPR REPEAT CONTAINING PROTEIN |
Ama23689 | ZINC FINGER PROTEIN 622 |
Ama23690 | |
Ama23691 | SERINE/THREONINE-PROTEIN KINASE PIM |
Ama23692 | COPPER AMINE OXIDASE |
Ama23694 | SUBGROUP IIII AMINOTRANSFERASE |
Ama23695 | LD11652P |
Ama23697 | |
Ama23701 | |
Ama23702 | NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1 |
Ama23713 | |
Ama23714 | |
Ama23715 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Ama23716 | THAP DOMAIN PROTEIN |
Ama23717 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama23718 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Ama23719 | |
Ama23720 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Ama23721 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama23722 | INHIBITOR OF APOPTOSIS |
Ama23723 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama23724 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama23725 | |
Ama23726 | |
Ama23727 | |
Ama23728 | |
Ama23729 | DENTIN SIALOPHOSPHOPROTEIN |
Ama23733 | NUCLEAR HORMONE RECEPTOR |
Ama23734 | |
Ama23735 | |
Ama23736 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama23737 | |
Ama23739 | |
Ama23740 | 60S RIBOSOMAL PROTEIN L12 |
Ama23741 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23742 | OS05G0424000 PROTEIN-RELATED |
Ama23743 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
Ama23745 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama23746 | |
Ama23747 | TETRASPANIN |
Ama23748 | |
Ama23749 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |