The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23540 | |
Ama23545 | |
Ama23546 | RIBOSOMAL PROTEIN S15P/S13E |
Ama23547 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama23548 | PDZ DOMAIN CONTAINING PROTEIN |
Ama23550 | PDZ DOMAIN CONTAINING PROTEIN |
Ama23552 | CNH DOMAIN CONTAINING |
Ama23553 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Ama23554 | |
Ama23555 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama23556 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Ama23557 | CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED |
Ama23558 | O-ACYLTRANSFERASE |
Ama23559 | RUN AND SH3 DOMAIN CONTAINING |
Ama23561 | METAL DEPENDENT HYDROLASE - RELATED |
Ama23562 | WD REPEAT CONTAINING PROTEIN |
Ama23563 | COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17 |
Ama23564 | |
Ama23566 | XANTHINE DEHYDROGENASE |
Ama23567 | XANTHINE DEHYDROGENASE |
Ama23568 | XANTHINE DEHYDROGENASE |
Ama23569 | CYTOKINESIS PROTEIN 3 |
Ama23571 | MULTIPLE PDZ DOMAIN PROTEIN |
Ama23572 | |
Ama23573 | ZINC FINGER PROTEIN |
Ama23575 | AKT1 SUBSTRATE 1 PROTEIN |
Ama23576 | |
Ama23577 | |
Ama23578 | EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN |
Ama23579 | ALPHA-L-IDURONIDASE |
Ama23580 | XRP2 PROTEIN |
Ama23581 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
Ama23582 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
Ama23583 | |
Ama23584 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Ama23585 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Ama23587 | |
Ama23588 | |
Ama23589 | MALE STERILITY PROTEIN 2-RELATED |
Ama23590 | PUTATIVE-RELATED |
Ama23591 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama23592 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama23593 | FMRFAMIDE RECEPTOR-RELATED |
Ama23594 | PUTATIVE-RELATED |
Ama23596 | 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
Ama23597 | |
Ama23598 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
Ama23599 | |
Ama235_5db7b01a | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
Ama23600 | NUCLEOTIDE KINASE |