The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama23148 | |
Ama23149 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama23152 | ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE |
Ama23154 | |
Ama23155 | PHENYLALANYL-TRNA SYNTHETASE |
Ama23156 | CNH DOMAIN CONTAINING |
Ama23157 | TRANSLATION INITIATION FACTOR IF-2-RELATED |
Ama23158 | RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN |
Ama23160 | |
Ama23161 | INHIBITOR OF APOPTOSIS |
Ama23163 | |
Ama23164 | PARANEOPLASTIC ANTIGEN |
Ama23165 | |
Ama23171 | PIRNA BIOGENESIS PROTEIN EXD1 |
Ama23174 | EGALITARIAN, ISOFORM B |
Ama23175 | |
Ama23176 | |
Ama23177 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23179 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama23180 | O-ACYLTRANSFERASE |
Ama23182 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
Ama23183 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama23184 | F-BOX ONLY PROTEIN 47 |
Ama23185 | PROTEIN LIN-7 HOMOLOG |
Ama23186 | UBX DOMAIN CONTAINING PROTEIN |
Ama23187 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
Ama23189 | GROWTH HORMONE-INDUCIBLE SOLUBLE PROTEIN-RELATED |
Ama23191 | NADH-CYTOCHROME B5 REDUCTASE |
Ama23192 | CENTROMERE PROTEIN E |
Ama23193 | |
Ama23195 | |
Ama23196 | |
Ama23197 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama23198 | MALE STERILITY PROTEIN 2-RELATED |
Ama231_5db7b01a | |
Ama23200 | |
Ama23201 | PROTEIN PHOSPHATASE INHIBITOR |
Ama23202 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
Ama23204 | CASPASE-ACTIVATED DNASE |
Ama23205 | FOUR-JOINTED BOX PROTEIN 1 |
Ama23206 | HISTIDINE-RICH GLYCOPROTEIN |
Ama23208 | TUMOR PROTEIN P53-INDUCIBLE PROTEIN 11 |
Ama23211 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama23212 | ALDO/KETO REDUCTASE |
Ama23213 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama23214 | DIMETHYLANILINE MONOOXYGENASE |
Ama23215 | DIMETHYLANILINE MONOOXYGENASE |
Ama23216 | |
Ama23217 | DIMETHYLANILINE MONOOXYGENASE |
Ama23218 |