The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama22989 | THAP DOMAIN PROTEIN |
Ama22990 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI |
Ama22991 | PROTEIN CBG16327 |
Ama22992 | LD33804P |
Ama22993 | |
Ama22994 | |
Ama22995 | COMM DOMAIN-CONTAINING PROTEIN 9 |
Ama22996 | |
Ama22997 | UNCHARACTERIZED |
Ama229_5db7b01a | LEISHMANOLYSIN-LIKE PEPTIDASE |
Ama23000 | TRANSCRIPTION FACTOR ONECUT |
Ama23002 | |
Ama23003 | PROTEIN CBG03580 |
Ama23005 | WD40 REPEAT PROTEIN 4 |
Ama23007 | |
Ama23009 | TRANSPOSABLE ELEMENT-RELATED |
Ama23014 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
Ama23016 | UBIQUITIN |
Ama23020 | CHOLINE/ETHANOALAMINE KINASE |
Ama23022 | HILLARIN |
Ama23024 | |
Ama23029 | YEAST SPT2-RELATED |
Ama23030 | RHO-GTPASE-ACTIVATING PROTEIN LRG1 |
Ama23031 | SODIUM CHANNEL MODIFIER 1 |
Ama23033 | |
Ama23034 | SERINE/ARGININE RICH SPLICING FACTOR |
Ama23035 | |
Ama23036 | |
Ama23037 | CYTOSOLIC CARBOXYPEPTIDASE |
Ama23040 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
Ama23041 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama23042 | 40S RIBOSOMAL PROTEIN S10 |
Ama23043 | TRANSPOSABLE ELEMENT-RELATED |
Ama23044 | ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 |
Ama23045 | KINESIN-LIKE PROTEIN KLP-3 |
Ama23048 | GLYCOPROTEIN HORMONE RECEPTOR |
Ama23050 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
Ama23051 | |
Ama23054 | MULTICOPPER OXIDASE-RELATED |
Ama23056 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama23058 | FLAP ENDONUCLEASE FAMILY MEMBER |
Ama23059 | |
Ama23061 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
Ama23062 | RIKEN CDNA 9930021J03 GENE |
Ama23064 | TYROSINE-PROTEIN KINASE BAZ1B |
Ama23065 | |
Ama23067 | FIMBRIN/PLASTIN |
Ama23068 | MITOCHONDRIAL DISTRIBUTION REGULATOR MISATO |
Ama23069 | CAT EYE SYNDROME CRITICAL REGION PROTEIN 2 |
Ama23070 |